Como atualizar estatísticas para tabelas de sistema de um banco de dados

Recentemente, atualizamos muitas de nossas instâncias para 2016. Como resultado, uma instrução SELECT de sqlpackage.exe está expirando em algumas instâncias.

Depois de alguns testes, descobri que ao atualizar as estatísticas nas tabelas do sistema do banco de dados que aparecem no plano de execução, o SELECT parou de atingir o tempo limite.

update statistics sys.[sysclsobjs] with fullscan
update statistics sys.[syscolpars] with fullscan
update statistics sys.[sysidxstats] with fullscan
update statistics sys.[sysiscols] with fullscan
update statistics sys.[sysobjvalues] with fullscan

Existe alguma maneira através dos pacotes de manutenção padrão, scripts de Ola Hallengren ou algum outro processo para atualizar apenas as estatísticas da tabela do sistema?

Atualização 08/01

Aqui estão as etapas que segui após a atualização

Sobre o traceflag 4199 KB974006

-- for the instance
/* 
Turn on traceflag 4199 (my understanding of this traceflag is that it disables
optimizer hotfixes in 2016
*/

-- disable automatic numa
sp_configure 'automatic soft-NUMA disabled', 1
GO

-- For each database
-- Turn on Query optimizer hotfixes
-- Turn off Legacy cardinality estimation

exec sp_MSforeachDB 'ALTER DATABASE [?] SET COMPATIBILITY_LEVEL = 130;
USE [?]; 
ALTER DATABASE SCOPED CONFIGURATION SET QUERY_OPTIMIZER_HOTFIXES = ON;
ALTER DATABASE SCOPED CONFIGURATION SET LEGACY_CARDINALITY_ESTIMATION = OFF;

-- update statistics for all tables, system tables are ignored
EXEC sp_MSforeachtable ''UPDATE STATISTICS [?] WITH FULLSCAN''
'

Atualização 08/02

Aqui está o SELECT do sqlpackage.exe causando timeouts para o TFS

SELECT * FROM (
SELECT 
SCHEMA_NAME([o].[schema_id]) AS [SchemaName],
[si].[object_id] AS [ColumnSourceId],
[o].[name] AS [ColumnSourceName],
[o].[type] AS [ColumnSourceType],
[ic].[column_id] AS [ColumnId],
[c].[name] AS [ColumnName],
[si].[index_id] AS [IndexId],
[si].[name] AS [IndexName],
[ds].[type] AS [DataspaceType],
[ds].[data_space_id] AS [DataspaceId],
[ds].[name] AS [DataspaceName],
[si].[fill_factor] AS [FillFactor],
[si].[is_padded] AS [IsPadded],
[si].[is_disabled] AS [IsDisabled],
[si].[allow_page_locks] AS [DoAllowPageLocks],
[si].[allow_row_locks] AS [DoAllowRowLocks],
[sit].[cells_per_object] AS [CellsPerObject],
[sit].[bounding_box_xmin] AS [XMin],
[sit].[bounding_box_xmax] AS [XMax],
[sit].[bounding_box_ymin] AS [YMin],
[sit].[bounding_box_ymax] AS [YMax],
[sit].[level_1_grid] AS [Level1Grid],
[sit].[level_2_grid] AS [Level2Grid],
[sit].[level_3_grid] AS [Level3Grid],
[sit].[level_4_grid] AS [Level4Grid],
[sit].[tessellation_scheme] AS [TessellationScheme],
[s].[no_recompute] AS [NoRecomputeStatistics],
[p].[data_compression] AS [DataCompressionId],
CONVERT(bit, CASE WHEN [ti].[data_space_id] = [ds].[data_space_id] THEN 1 ELSE 0 END)
AS [EqualsParentDataSpace]
FROM
[sys].[spatial_indexes] AS [si] WITH (NOLOCK)
INNER JOIN [sys].[objects] AS [o] WITH (NOLOCK) ON [si].[object_id] = [o].[object_id]
INNER JOIN [sys].[spatial_index_tessellations] [sit] WITH (NOLOCK) ON [si].[object_id] = [sit].[object_id] AND [si].[index_id] = [sit].[index_id]
INNER JOIN [sys].[data_spaces] AS [ds] WITH (NOLOCK) ON [ds].[data_space_id] = [si].[data_space_id] 
INNER JOIN [sys].[index_columns] AS [ic] WITH (NOLOCK) ON [si].[object_id] = [ic].[object_id] AND [si].[index_id] = [ic].[index_id]
INNER JOIN [sys].[columns] AS [c] WITH (NOLOCK) ON [si].[object_id] = [c].[object_id] AND [ic].[column_id] = [c].[column_id]
INNER JOIN [sys].[objects] AS [o2] WITH (NOLOCK) ON [o2].[parent_object_id] = [si].[object_id]
INNER JOIN [sys].[stats] AS [s] WITH (NOLOCK) ON [o2].[object_id] = [s].[object_id] AND [s].[name] = [si].[name]
INNER JOIN [sys].[partitions] AS [p] WITH (NOLOCK) ON [p].[object_id] = [o2].[object_id] AND [p].[partition_number] = 1
LEFT JOIN [sys].[indexes] AS [ti] WITH (NOLOCK) ON [o].[object_id] = [ti].[object_id]
LEFT JOIN [sys].[tables] AS [t] WITH (NOLOCK) ON [t].[object_id] = [si].[object_id]
WHERE [si].[is_hypothetical] = 0
AND [ti].[index_id] < 2
AND OBJECTPROPERTY([o].[object_id], N'IsSystemTable') = 0
AND ([t].[is_filetable] = 0 OR [t].[is_filetable] IS NULL)
AND ([o].[is_ms_shipped] = 0 AND NOT EXISTS (SELECT *
FROM [sys].[extended_properties]
WHERE [major_id] = [o].[object_id]
AND [minor_id] = 0
AND [class] = 1
AND [name] = N'microsoft_database_tools_support'
))
) AS [_results] 

Se eu não atualizar as estatísticas da tabela do sistema para o banco de dados, este SELECT pode e irá expirar ao implantar via sqlpackage.exe